Illumina MiSeq sequencing - SRA

ERX3281332: Illumina MiSeq sequencing
1 ILLUMINA (Illumina MiSeq) run: 13,151 spots, 1.3M bases, 780,508b downloads

Submitted by: INRA (Nouvelle-Aquitaine-Bordeaux)

Study: Sequence based microsatellite genotyping development for Alosa alosa and Alosa fallax.

PRJEB31908 • ERP114523 • All experiments • All runs

New microsatellite markers have been optimized for the development of a sequence based microsatellite genotyping approach. A total of 28 loci were amplified in a multiplexed PCR and sequenced for 156 individuals (from A. alosa, A. fallax and their hybrids) that were repeated to estimate genotyping error. Data were used as a proof of concept of the method and 24 high quality loci were validated. This method has then been applied to genotype additional individuals.

Sample: French_alosa_sample

SAMEA5538707 • ERS3340770 • All experiments • All runs

Organism: Alosa alosa

Library:

Name: unspecified

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 13,151 spots, 1.3M bases, 780,508b

Run	# of Spots	# of Bases	Size	Published
ERR3254560	13,151	1.3M	780,508b	2019-05-28

ID:: 7931357

SRA

Sequence Read Archive

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